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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21687995_21693086_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21687995 - 21693086

Intron Length:

5092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TATTTTCTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

GCTTGCTTATTT

Flanking Amino Acid:

GKSTELWAGSVGSDFGYFPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

77.4

37.4

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

80.2

0.68

77.5

36.5

Minor 5ss

40.4

-1.1

2.8

53.8

42.8

Minor BPS

53.6

0.19

72.14

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023079

21686681 - 21713555

26875

ENSAPLT00000048019

21687155 - 21712979

25825

ENSAPLT00000017285

21687155 - 21712979

25825

ENSAPLT00000039633

21686681 - 21713555

26875

ENSAPLT00000017190

21687155 - 21712979

25825

ENSAPLT00000037742

21687155 - 21712979

25825

ENSAPLT00000006603

21687155 - 21712979

25825

ENSAPLT00000024054

21687155 - 21712979

25825

ENSAPLT00000048105

21686681 - 21712979

26299