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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21694226_21694396_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21694226 - 21694396

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATA|GCAAATGAG

5'SS Class:

weak_major

3'SS Sequence:

CACCATAACAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAGCAT

U12 Branch Point Sequence:

CTCACCATAACA

Flanking Amino Acid:

ELLKSSKETIEVDSFLIEGT

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.9

0.24

1.3

58.7

43.1

Major BPS

55.5

0.14

1.4

40.9

Major PPT

44.3

-0.3

1.6

42.4

35.7

Minor 5ss

22.9

-3.1

37.8

Minor BPS

0.31

1.7

69.02

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017190

21687155 - 21712979

25825