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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21694407_21694466_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

21694407 - 21694466

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTTTTCTTA

5'SS Class:

weak_minor

3'SS Sequence:

AGTAGTCATGAAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

GTAGTCATGAAG

Flanking Amino Acid:

EALTITEEVDKNSQGDQTAH

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

47.2

-0.1

1.1

36.6

Major BPS

0.67

1.1

77.7

37.1

Major PPT

52.2

0.05

1.2

50.2

42.7

Minor 5ss

56.4

0.22

2.3

67.2

39.1

Minor BPS

42.9

-0.7

1.8

45.64

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048019

21687155 - 21712979

25825

ENSAPLT00000037742

21687155 - 21712979

25825