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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21697107_21698088_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21697107 - 21698088

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

AATACTTAAATT

Flanking Amino Acid:

EQEDDQLNAQGDAKEDEYDT

Intron Amino Acid Position:

1220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

72.5

39.9

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

85.1

0.79

0.8

79.4

32.6

Minor 5ss

38.3

-1.3

3.4

56.2

Minor BPS

57.1

0.3

1.7

72.07

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048105

21686681 - 21712979

26299

ENSAPLT00000039633

21686681 - 21713555

26875

ENSAPLT00000024054

21687155 - 21712979

25825

ENSAPLT00000023079

21686681 - 21713555

26875