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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21698374_21699318_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21698374 - 21699318

Intron Length:

945

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCTTT

5'SS Class:

weak_major

3'SS Sequence:

CTCCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

CGGTGCCTAACG

Flanking Amino Acid:

EESAREDTAAAPGDGDGGGG

Intron Amino Acid Position:

1315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

78.8

38.3

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

74.4

0.55

0.7

68.7

Minor 5ss

68.6

0.63

2.3

82.3

37.5

Minor BPS

46.7

-0.3

2.2

52.54

47.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039633

21686681 - 21713555

26875

ENSAPLT00000023079

21686681 - 21713555

26875