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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21698374_21703426_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21698374 - 21703426

Intron Length:

5053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTTCTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACTAT

U12 Branch Point Sequence:

GTTACTATAAGC

Flanking Amino Acid:

EESAREDTAAVTEKQLAEKI

Intron Amino Acid Position:

1315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

78.8

38.3

Major BPS

62.1

0.3

1.4

61.1

Major PPT

86.8

0.83

0.6

81.3

30.7

Minor 5ss

68.6

0.63

2.3

82.3

37.5

Minor BPS

49.5

-0

1.9

64.83

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048105

21686681 - 21712979

26299