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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21699405_21700021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21699405 - 21700021

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCGC

5'SS Class:

strong_major

3'SS Sequence:

AATTGGTTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TCAATGTTAATT

Flanking Amino Acid:

GPAARRLLLQLVATLPEDIR

Intron Amino Acid Position:

1344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

72.2

39.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

70.7

0.47

66.6

44.2

Minor 5ss

29.1

-2.4

2.8

35.6

Minor BPS

50.2

0.08

2.1

68.64

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039633

21686681 - 21713555

26875

ENSAPLT00000023079

21686681 - 21713555

26875