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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21700154_21701326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21700154 - 21701326

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

CTTTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TATGGCTAATTT

Flanking Amino Acid:

AVIFWRTCLSVKSRIYQVTE

Intron Amino Acid Position:

1388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

70.8

34.6

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

88.2

0.86

0.6

22.6

Minor 5ss

32.8

-2

2.7

40.4

39.1

Minor BPS

43.7

-0.4

2.3

64.27

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039633

21686681 - 21713555

26875

ENSAPLT00000023079

21686681 - 21713555

26875