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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21700158_21703408_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21700158 - 21703408

Intron Length:

3251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTACAATTC

5'SS Class:

weak_major

3'SS Sequence:

CAGTTACTATAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

TTTTCCTCCAGG

Flanking Amino Acid:

VIFWRTCLSVTFFFFLVTEK

Intron Amino Acid Position:

1030

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.8

0.09

1.1

54.1

38.5

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

0.11

1.1

58.5

Minor 5ss

42.1

-0.9

3.4

54.9

43.8

Minor BPS

49.7

-0.1

2.3

67.41

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021287

21699019 - 21712979

13961

ENSAPLT00000017285

21687155 - 21712979

25825

ENSAPLT00000017190

21687155 - 21712979

25825

ENSAPLT00000006603

21687155 - 21712979

25825

ENSAPLT00000024054

21687155 - 21712979

25825