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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21700158_21703426_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21700158 - 21703426

Intron Length:

3269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTACAATTC

5'SS Class:

weak_major

3'SS Sequence:

TTTTTCTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACTAT

U12 Branch Point Sequence:

GTTACTATAAGC

Flanking Amino Acid:

VIFWRTCLSVMTEKQLAEKI

Intron Amino Acid Position:

1162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.8

0.09

1.1

54.1

38.5

Major BPS

62.1

0.3

1.4

61.1

Major PPT

86.8

0.83

0.6

81.3

30.7

Minor 5ss

42.1

-0.9

3.4

54.9

43.8

Minor BPS

49.5

-0

1.9

64.83

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048019

21687155 - 21712979

25825

ENSAPLT00000037742

21687155 - 21712979

25825