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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21701349_21703426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21701349 - 21703426

Intron Length:

2078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACTAT

U12 Branch Point Sequence:

GTTACTATAAGC

Flanking Amino Acid:

CLSVKSRIYQVTEKQLAEKI

Intron Amino Acid Position:

1395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

82.3

32.2

Major BPS

62.1

0.3

1.4

61.1

Major PPT

86.8

0.83

0.6

81.3

30.7

Minor 5ss

43.4

-0.7

3.1

60.6

44.5

Minor BPS

49.5

-0

1.9

64.83

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023079

21686681 - 21713555

26875

ENSAPLT00000039633

21686681 - 21713555

26875