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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21706381_21707687_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21706381 - 21707687

Intron Length:

1307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGGGTAGGCTTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

AAGACATGAGCT

Flanking Amino Acid:

ALAYKENEIEQKNRLGQYAV

Intron Amino Acid Position:

1341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.4

33.4

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

50.6

0.01

1.1

47.2

45.1

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

44.1

-0.3

1.9

59.29

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048019

21687155 - 21712979

25825