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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21706392_21706743_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21706392 - 21706743

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAACAAGC

5'SS Class:

weak_major

3'SS Sequence:

ACGAGACTGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATCCAC

U12 Branch Point Sequence:

GTTTACGAGACT

Flanking Amino Acid:

YKENEIEVGSLLNLQSTQNI

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.5

0.18

1.2

55.5

41.9

Major BPS

50.8

0.02

1.2

62.2

34.6

Major PPT

51.1

0.03

1.1

42.9

41.8

Minor 5ss

41.9

-0.9

58.4

40.3

Minor BPS

45.9

-0.2

2.5

72.88

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021287

21699019 - 21712979

13961