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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21707505_21707582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21707505 - 21707582

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGCTGC

5'SS Class:

major

3'SS Sequence:

TTTTAATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATTTTTTAATT

Flanking Amino Acid:

QIKQMMDVSRVKTMLSIVEE

Intron Amino Acid Position:

1274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

56.7

43.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.77

0.8

82.3

Minor 5ss

49.8

-0

2.4

58.8

46.1

Minor BPS

72.8

0.79

1.1

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021287

21699019 - 21712979

13961

ENSAPLT00000039633

21686681 - 21713555

26875

ENSAPLT00000017285

21687155 - 21712979

25825

ENSAPLT00000037742

21687155 - 21712979

25825

ENSAPLT00000017190

21687155 - 21712979

25825

ENSAPLT00000024054

21687155 - 21712979

25825

ENSAPLT00000006603

21687155 - 21712979

25825

ENSAPLT00000023079

21686681 - 21713555

26875

ENSAPLT00000048105

21686681 - 21712979

26299