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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21710775_21712614_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21710775 - 21712614

Intron Length:

1840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCAAAGTAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

TTTATGTCAAAG

Flanking Amino Acid:

PRREGSRGEFALIYLSRFPF

Intron Amino Acid Position:

1484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

72.5

0.56

1.1

63.4

Major PPT

47.6

-0.1

1.2

42.9

Minor 5ss

41.2

-1

2.9

54.6

44.5

Minor BPS

44.4

-0.5

2.3

57.36

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021287

21699019 - 21712979

13961

ENSAPLT00000017285

21687155 - 21712979

25825

ENSAPLT00000048019

21687155 - 21712979

25825

ENSAPLT00000017190

21687155 - 21712979

25825

ENSAPLT00000037742

21687155 - 21712979

25825

ENSAPLT00000024054

21687155 - 21712979

25825