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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21710782_21711111_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21710782 - 21711111

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAAGCTT

5'SS Class:

weak_major

3'SS Sequence:

CCTTTTCCCAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

ACTTCAAGACCA

Flanking Amino Acid:

REGSRGEFGKHITKTYMALS

Intron Amino Acid Position:

1528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.1

56.9

41.9

Major BPS

69.4

0.48

71.6

33.8

Major PPT

59.1

0.2

1.6

68.2

32.1

Minor 5ss

32.8

-2

3.7

52.4

45.5

Minor BPS

42.6

-0.5

2.1

57.04

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006603

21687155 - 21712979

25825