Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_21711451_21712104_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21711451 - 21712104

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TGATCTCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GGATTTTTAACC

Flanking Amino Acid:

DSPSSIEPPTANVSPKGPPS

Intron Amino Acid Position:

1963

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

32.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

68.1

0.41

62.6

38.5

Minor 5ss

38.4

-1.3

41.2

Minor BPS

68.2

0.55

1.2

68.4

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006319

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048105

21686681 - 21712979

26299

ENSAPLT00000039633

21686681 - 21713555

26875