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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21717961_21718433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21717961 - 21718433

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTACTATTAACC

Flanking Amino Acid:

IQKHVEKLTKGAAIFFEFKH

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

76.4

39.6

Major BPS

81.9

0.79

0.8

81.9

Major PPT

0.74

0.8

81.5

30.4

Minor 5ss

33.3

-1.9

3.5

49.7

46.5

Minor BPS

64.4

0.43

1.6

74.01

35.8

Associated Gene:

Gene:

AIDA

Ensembl Gene ID:

ENSAPLG00000006905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045580

21716899 - 21739823

22925

ENSAPLT00000020436

21716899 - 21739823

22925

ENSAPLT00000007195

21716899 - 21741346

24448