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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21722221_21724965_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21722221 - 21724965

Intron Length:

2745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTACTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TGTGCTTTACTC

Flanking Amino Acid:

FPARVPGANEGTLLPRLPSE

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.4

36.4

Major BPS

76.8

0.67

40.9

Major PPT

86.8

0.83

0.7

84.8

29.7

Minor 5ss

43.4

-0.7

2.8

56.4

47.7

Minor BPS

56.3

0.18

1.7

66.24

40.3

Associated Gene:

Gene:

AIDA

Ensembl Gene ID:

ENSAPLG00000006905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020436

21716899 - 21739823

22925

ENSAPLT00000007195

21716899 - 21741346

24448