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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21727318_21732214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21727318 - 21732214

Intron Length:

4897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

AGATTCTTACTG

Flanking Amino Acid:

KLEDLKKLEPILKNILTYNK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

93.2

0.97

0.6

89.1

19.8

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

52.3

-0

1.7

54.82

40.7

Associated Gene:

Gene:

AIDA

Ensembl Gene ID:

ENSAPLG00000006905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007195

21716899 - 21741346

24448

ENSAPLT00000045580

21716899 - 21739823

22925

ENSAPLT00000020436

21716899 - 21739823

22925