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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21733122_21739568_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21733122 - 21739568

Intron Length:

6447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

ATTTCAATATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

0.79

0.8

83.7

25.7

Major PPT

93.1

0.97

0.6

18.6

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

49.6

0.05

2.1

76.84

39.5

Associated Gene:

Gene:

AIDA

Ensembl Gene ID:

ENSAPLG00000006905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045580

21716899 - 21739823

22925

ENSAPLT00000020436

21716899 - 21739823

22925

ENSAPLT00000007195

21716899 - 21741346

24448