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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21747628_21748177_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

21747628 - 21748177

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCCTCA

5'SS Class:

weak_minor

3'SS Sequence:

TTTTGTTTTTCAG|T

3'SS Class:

minor_hybrid

U2 Branch Point Sequence:

TGTGGAA

U12 Branch Point Sequence:

TGGTGTGGAATG

Flanking Amino Acid:

IIQCQAEAQEVTIARAIELK

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

61.2

40.2

Major BPS

48.8

-0

1.5

49.1

46.3

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

70.2

0.68

1.7

74.6

41.5

Minor BPS

39.1

-0.9

2.3

44.08

42.6

Associated Gene:

Gene:

BROX

Ensembl Gene ID:

ENSAPLG00000030078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017529

21745369 - 21758232

12864