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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21748268_21748933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21748268 - 21748933

Intron Length:

666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCGTC

5'SS Class:

strong_major

3'SS Sequence:

GATGTATTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AAAGTCTTAAAG

Flanking Amino Acid:

YETANFYQKADQTLSSLDPA

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.3

37.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

69.4

0.44

61.5

43.4

Minor 5ss

-1

3.4

55.7

43.3

Minor BPS

-0

1.6

52.93

41.4

Associated Gene:

Gene:

BROX

Ensembl Gene ID:

ENSAPLG00000030078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017529

21745369 - 21758232

12864