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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21749020_21750349_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21749020 - 21750349

Intron Length:

1330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TCCTCTCTCATT

Flanking Amino Acid:

NLKTCFYMAYAYCYHGQTLL

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

1.2

84.4

33.5

Major BPS

76.8

0.67

40.9

Major PPT

70.8

0.47

0.8

70.5

Minor 5ss

39.8

-1.1

2.8

52.2

37.4

Minor BPS

-0

67.5

44.3

Associated Gene:

Gene:

BROX

Ensembl Gene ID:

ENSAPLG00000030078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017529

21745369 - 21758232

12864