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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21753970_21755104_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21753970 - 21755104

Intron Length:

1135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTATTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TATTCTATTACA

Flanking Amino Acid:

LEKCQRENGFIYFQKVPAEA

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

83.6

0.76

0.8

77.5

35.2

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

57.3

0.22

1.9

73.31

37.9

Associated Gene:

Gene:

BROX

Ensembl Gene ID:

ENSAPLG00000030078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017529

21745369 - 21758232

12864