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Intron Name: Anas_platyrhynchos_platyrhynchos_3_217699_249786_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

217699 - 249786

Intron Length:

32088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

MASNKFVIKCGNFAVLVDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

89.3

0.88

0.6

81.8

30.2

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

SLX4IP

Ensembl Gene ID:

ENSAPLG00000009267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036500

213038 - 289630

76593