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Intron Name: Anas_platyrhynchos_platyrhynchos_3_217699_253414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

217699 - 253414

Intron Length:

35716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTACTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAGAT

U12 Branch Point Sequence:

TTAGATGTGACT

Flanking Amino Acid:

MASNKFVIKEVCTLLEEVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

66.8

0.42

1.1

64.4

41.8

Major PPT

81.2

0.7

0.9

77.5

36.7

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

45.4

-0.2

2.2

68.23

Associated Gene:

Gene:

SLX4IP

Ensembl Gene ID:

ENSAPLG00000009267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009639

213038 - 288185

75148