Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_21785626_21793252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21785626 - 21793252

Intron Length:

7627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TCTTATTGCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CATTTCTTATTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

76.5

38.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

64.8

0.33

1.1

66.4

38.4

Minor 5ss

-1.1

2.9

57.4

41.1

Minor BPS

56.8

0.08

1.7

59.59

42.9

Associated Gene:

Gene:

DISP1

Ensembl Gene ID:

ENSAPLG00000007189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037964

21785500 - 21864484

78985