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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21793397_21812848_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

21793397 - 21812848

Intron Length:

19452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCATTTTGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.5

36.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

29.1

-2.4

3.4

38.8

46.3

Minor BPS

0.55

1.4

76.98

39.7

Associated Gene:

Gene:

DISP1

Ensembl Gene ID:

ENSAPLG00000007189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048153

21793253 - 21864484

71232