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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2186004_2191797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2186004 - 2191797

Intron Length:

5794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

CGTGTGACAACT

Flanking Amino Acid:

CEAAEASSNDAEMSSQGESK

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

87.1

0.84

0.8

84.6

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

-0.7

2.3

57.08

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013047

1909148 - 2191866

282719