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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21928794_21929236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21928794 - 21929236

Intron Length:

443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TTTTTGTTACAG

Flanking Amino Acid:

PSYQVYCVKTEQTWPNTQET

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

88.3

0.86

0.8

83.2

31.9

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

47.5

-0.3

2.4

63.72

44.3

Associated Gene:

Gene:

SUSD4

Ensembl Gene ID:

ENSAPLG00000007276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046566

21925016 - 21996028

71013

ENSAPLT00000007544

21926427 - 21996028

69602