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Intron Name: Anas_platyrhynchos_platyrhynchos_3_21929429_21943130_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21929429 - 21943130

Intron Length:

13702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTGCCCAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTTAA

U12 Branch Point Sequence:

TTCTCCTTTTCT

Flanking Amino Acid:

DSPPRCLDVEVCPLPPMVSH

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

29.3

Major BPS

0.17

1.3

49.4

Major PPT

58.4

0.19

1.1

39.2

Minor 5ss

36.6

-1.5

3.4

45.2

Minor BPS

47.7

-0.1

3.6

84.03

42.9

Associated Gene:

Gene:

SUSD4

Ensembl Gene ID:

ENSAPLG00000007276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046566

21925016 - 21996028

71013

ENSAPLT00000007544

21926427 - 21996028

69602