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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22037516_22038376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22037516 - 22038376

Intron Length:

861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAGAT

U12 Branch Point Sequence:

ATGGTCTGACTT

Flanking Amino Acid:

SGVVQLSLAEWLCCTLV*

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.8

80.9

28.8

Major BPS

61.5

0.29

1.1

56.9

40.5

Major PPT

75.4

0.57

0.8

69.4

31.2

Minor 5ss

34.9

-1.7

3.4

46.2

49.1

Minor BPS

46.6

-0.1

1.8

62.1

42.7

Associated Gene:

Gene:

CAPN8

Ensembl Gene ID:

ENSAPLG00000007441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007897

22037270 - 22066064

28795