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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22039748_22040065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22039748 - 22040065

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TATTTCCTAACA

Flanking Amino Acid:

HEMQNALREAELCPSLPFPL

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

87.4

0.84

0.7

84.9

29.9

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

70.9

0.65

1.6

81.24

33.5

Associated Gene:

Gene:

CAPN8

Ensembl Gene ID:

ENSAPLG00000007441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028880

22039307 - 22066064

26758