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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22042921_22043834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22042921 - 22043834

Intron Length:

914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTGTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCATGTTAACA

Flanking Amino Acid:

KTLFQKLSGEDCEVTAIELQ

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

100

1.24

0.5

100

Major PPT

80.8

0.69

0.9

73.4

41.9

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

56.8

0.21

2.1

71.25

41.2

Associated Gene:

Gene:

CAPN8

Ensembl Gene ID:

ENSAPLG00000007441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037895

22037622 - 22066064

28443

ENSAPLT00000028880

22039307 - 22066064

26758

ENSAPLT00000007897

22037270 - 22066064

28795