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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22043901_22044578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22043901 - 22044578

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACACC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

ATGTTGTAAATT

Flanking Amino Acid:

GDMVAAKPYEPHVDNKDIDD

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

72.1

37.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

81.9

0.72

0.7

77.6

24.4

Minor 5ss

-1.1

2.9

52.8

44.1

Minor BPS

47.7

-0.1

2.3

69.02

42.9

Associated Gene:

Gene:

CAPN8

Ensembl Gene ID:

ENSAPLG00000007441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007897

22037270 - 22066064

28795

ENSAPLT00000037895

22037622 - 22066064

28443

ENSAPLT00000028880

22039307 - 22066064

26758