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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22052836_22053444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22052836 - 22053444

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

GTGGATCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

TTGTTGTGGATC

Flanking Amino Acid:

HAYSVTGAEEVHYRGWPEKL

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

68.8

43.8

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

0.32

59.4

42.6

Minor 5ss

37.2

-1.4

46.7

48.6

Minor BPS

46.1

-0.3

2.1

61.09

39.2

Associated Gene:

Gene:

CAPN8

Ensembl Gene ID:

ENSAPLG00000007441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037895

22037622 - 22066064

28443

ENSAPLT00000028880

22039307 - 22066064

26758

ENSAPLT00000007897

22037270 - 22066064

28795