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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22053529_22054402_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22053529 - 22054402

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGACTG

5'SS Class:

major

3'SS Sequence:

TTTAATGCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTTTTAATG

Flanking Amino Acid:

AGSLLGCSIDVTRASETEAI

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

64.5

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

59.7

0.22

1.1

56.8

43.2

Minor 5ss

32.6

-2

3.3

43.4

Minor BPS

67.7

0.42

1.2

65.81

36.4

Associated Gene:

Gene:

CAPN8

Ensembl Gene ID:

ENSAPLG00000007441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037895

22037622 - 22066064

28443

ENSAPLT00000028880

22039307 - 22066064

26758

ENSAPLT00000007897

22037270 - 22066064

28795