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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22054868_22055921_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22054868 - 22055921

Intron Length:

1054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTCTC

5'SS Class:

major

3'SS Sequence:

TTCTTTTTGTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TCAGCCCTAACC

Flanking Amino Acid:

EDYAGIFHFQFWQYGEWVDV

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

68.8

42.3

Major BPS

74.9

0.62

81.3

29.9

Major PPT

81.9

0.72

0.9

84.5

30.4

Minor 5ss

51.5

0.05

2.4

70.5

39.9

Minor BPS

58.5

0.25

1.8

67.89

43.4

Associated Gene:

Gene:

CAPN8

Ensembl Gene ID:

ENSAPLG00000007441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037895

22037622 - 22066064

28443

ENSAPLT00000028880

22039307 - 22066064

26758

ENSAPLT00000007897

22037270 - 22066064

28795