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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22070772_22075345_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22070772 - 22075345

Intron Length:

4574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAG

U12 Branch Point Sequence:

TTTTTCTTACAG

Flanking Amino Acid:

TRTDICQGALGDCWLLAAIA

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

52.9

0.07

1.6

51.7

43.9

Major PPT

96.2

1.04

0.5

91.9

19.1

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

63.2

0.28

1.8

72.05

40.8

Associated Gene:

Gene:

CAPN2

Ensembl Gene ID:

ENSAPLG00000009576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010174

22069528 - 22091543

22016