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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22078218_22079791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22078218 - 22079791

Intron Length:

1574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTACCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TCTACATACATT

Flanking Amino Acid:

HAYSVTGAEEVNFRGSVQKL

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

70.2

0.5

1.1

77.2

Major PPT

80.7

0.69

0.8

78.4

29.2

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

43.8

-0.4

2.3

65.3

45.5

Associated Gene:

Gene:

CAPN2

Ensembl Gene ID:

ENSAPLG00000009576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010174

22069528 - 22091543

22016