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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22080678_22081161_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22080678 - 22081161

Intron Length:

484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGAGTG

5'SS Class:

major

3'SS Sequence:

ATCCACTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

GTTTGTATAAAT

Flanking Amino Acid:

ATAGGCRNYPNTFWTNPQYL

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

63.6

41.3

Major BPS

74.5

0.61

79.6

29.1

Major PPT

71.1

0.48

0.9

61.6

39.1

Minor 5ss

35.3

-1.7

3.5

43.9

44.5

Minor BPS

49.5

0.04

2.1

74.97

41.5

Associated Gene:

Gene:

CAPN2

Ensembl Gene ID:

ENSAPLG00000009576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010174

22069528 - 22091543

22016