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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22085575_22086208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22085575 - 22086208

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TCTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TCTTTCTTTACA

Flanking Amino Acid:

RSILNKIMAKRQDIKSDGFS

Intron Amino Acid Position:

564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

1.3

78.8

35.5

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

92.2

0.95

0.6

87.4

23.1

Minor 5ss

38.4

-1.3

2.7

46.6

34.4

Minor BPS

0.65

1.6

78.67

37.8

Associated Gene:

Gene:

CAPN2

Ensembl Gene ID:

ENSAPLG00000009576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010174

22069528 - 22091543

22016