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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22086274_22087427_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

22086274 - 22087427

Intron Length:

1154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TGACTCAAACAAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

ATTACCTTGACT

Flanking Amino Acid:

TCKIMVDMLDNDGSGKLGLK

Intron Amino Acid Position:

586

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

64.4

42.3

Major BPS

62.7

0.32

1.2

33.2

Major PPT

48.4

-0

1.2

44.1

40.4

Minor 5ss

98.3

1.62

0.6

94.6

16.9

Minor BPS

80.7

1.05

1.1

90.79

32.1

Associated Gene:

Gene:

CAPN2

Ensembl Gene ID:

ENSAPLG00000009576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010174

22069528 - 22091543

22016