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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22088251_22088395_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22088251 - 22088395

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTGTA

5'SS Class:

major

3'SS Sequence:

CATCGCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTGTTTTAAAT

Flanking Amino Acid:

YEMRRALEAAGFKLNCQLHQ

Intron Amino Acid Position:

635

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

Major BPS

90.4

0.7

90.2

19.3

Major PPT

71.5

0.48

0.9

66.4

39.1

Minor 5ss

42.4

-0.8

3.1

58.1

46.4

Minor BPS

0.67

1.5

84.29

36.6

Associated Gene:

Gene:

CAPN2

Ensembl Gene ID:

ENSAPLG00000009576

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010174

22069528 - 22091543

22016