Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_22098109_22099282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22098109 - 22099282

Intron Length:

1174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

ATAAAAGTAATT

Flanking Amino Acid:

VNVNAADSDGWTPLHCAASC

Intron Amino Acid Position:

1014

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

75.3

0.57

0.9

68.9

37.1

Minor 5ss

36.8

-1.5

3.5

53.4

44.8

Minor BPS

42.5

-0.4

2.3

62.57

Associated Gene:

Gene:

TP53BP2

Ensembl Gene ID:

ENSAPLG00000011682

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019366

22091986 - 22138540

46555

ENSAPLT00000012250

22094355 - 22138540

44186