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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22099417_22100020_R


Intron Information:

Intron Rank:
14

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
22099417 - 22100020

Intron Length:
604

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAAATG

5'SS Class:
major

3'SS Sequence:
TCTGGCTGAATAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
ATTTCAC

U12 Branch Point Sequence:
TCTGGCTGAATA

Flanking Amino Acid:
FDLVQRIIYEVEDPSMPNDE

Intron Amino Acid Position:
970

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1.1
69
41.8

Major BPS
81.3
0.78
0.8
83.4
26.1

Major PPT
58.9
0.2
1
54.4
40.3

Minor 5ss
35.4
-1.7
3.3
48.6
47.1

Minor BPS
49.5
-0
2
63.53
43.4

Associated Gene:

Gene:
TP53BP2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22091986 - 22138540
46555

22094355 - 22138540
44186