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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22104605_22106291_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
22104605 - 22106291

Intron Length:
1687

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATAGCT

5'SS Class:
strong_major

3'SS Sequence:
TGTTCTCTCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTCAT

U12 Branch Point Sequence:
ACCTGTTTCATT

Flanking Amino Acid:
GSSSQAKALAGSVVPSSKPS

Intron Amino Acid Position:
411

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.3
0.74
1
74.4
33.9

Major BPS
82.2
0.8
1.1
85.7
34.9

Major PPT
77.1
0.61
0.8
70
36.5

Minor 5ss
33.1
-1.9
3.4
48.8
46.8

Minor BPS
45.8
-0.2
2.1
60.82
44.2

Associated Gene:

Gene:
TP53BP2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22094355 - 22138540
44186

22091986 - 22138540
46555