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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22107102_22107494_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22107102 - 22107494

Intron Length:
393

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATGCAG

5'SS Class:
major

3'SS Sequence:
CGAATTTATTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTTAT

U12 Branch Point Sequence:
CCCCCCCGAATT

Flanking Amino Acid:
ELDRLYKELQLRNKLNQEQN

Intron Amino Acid Position:
277

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.1
0.64
1.1
62.4
43.6

Major BPS
79.9
0.74
0.9
69.7
37.1

Major PPT
69.2
0.43
1
66
44.2

Minor 5ss
30.2
-2.3
3.2
38.2
46.7

Minor BPS
46.2
-0.2
1.8
58.68
44.6

Associated Gene:

Gene:
TP53BP2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22094355 - 22138540
44186

22091986 - 22138540
46555