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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22112844_22114750_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
22112844 - 22114750

Intron Length:
1907

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGTGTT

5'SS Class:
strong_major

3'SS Sequence:
TATTTCTATCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TTTATGTTACCC

Flanking Amino Acid:
RHERSPCWESGTGQRSQDPS

Intron Amino Acid Position:
97

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90.3
0.95
0.8
87
27.8

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
77.7
0.62
0.9
71
39.7

Minor 5ss
44.7
-0.6
3.2
66.4
45.1

Minor BPS
49.3
-0
2.3
70.24
41.4

Associated Gene:

Gene:
TP53BP2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22094355 - 22138540
44186

22091986 - 22138540
46555